BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029A07LP1|AL428999
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1159 1632 0.0
>3x_Contig1159
Length = 4873
Score = 1632 bits (822), Expect = 0.0
Identities = 868/883 (98%), Gaps = 2/883 (0%)
Strand = Plus / Minus
Query: 1 atctaatagtccaatgaaatgngccaggaccatccggaggrtcctantngnccatgagct 60
||||||||||||||||||||| |||||||||||||||||| | | | | |||||||||
Sbjct: 2962 atctaatagtccaatgaaatgggccaggaccatccggaggatggtccttg-ccatgagct 2904
Query: 61 ggtcaagcatataccgatgccagcgtccatcccaacgtccatcactctctacgagccgcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2903 ggtcaagcatataccgatgccagcgtccatcccaacgtccatcactctctacgagccgcg 2844
Query: 121 tttttcagtgcattccaatggaaatgggaatttctctttactcgcgcaaagggggcgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2843 tttttcagtgcattccaatggaaatgggaatttctctttactcgcgcaaagggggcgaaa 2784
Query: 181 aggcagttttccaaagaaaggaactaaagaaaaaaatctttaattacagaaacacagaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2783 aggcagttttccaaagaaaggaactaaagaaaaaaatctttaattacagaaacacagaaa 2724
Query: 241 acaaacagacagaaacaacaacaacaataagacaggtgagagacagaggtctgtatacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2723 acaaacagacagaaacaacaacaacaataagacaggtgagagacagaggtctgtatacag 2664
Query: 301 tgactgctgtgttattgcgagcggcttctgtactggttatttttgtgtttgcacagggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2663 tgactgctgtgttattgcgagcggcttctgtactggttatttttgtgtttgcacagggtt 2604
Query: 361 agtcaggttgaaaaagatttgagatatagagagagagagagagagagacgcgcgcgcttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603 agtcaggttgaaaaagatttgagatatagagagagagagagagagagacgcgcgcgcttg 2544
Query: 421 ttagttttctgtgtgtttccggttttgtgtgccaaattgagagaacggaattataagagg 480
| ||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2543 tgagtgttctgtgtgtatccggttttgtgtgcaaaattgagagaacggaattataagagg 2484
Query: 481 aaacgaataaataaagcagagacaagaagtgcagttgggttgttgaacgtgacatttaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2483 aaacgaataaataaagcagagacaagaagtgcagttgggttgttgaacgtgacatttaaa 2424
Query: 541 gttagctgtgtttcgtgagtttagagtttagtctgttttgttttgtctcttaacgtttcg 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2423 gttagctgtgtttcgtgagtgtagagtttagtctgttttgttttgtctcttaacgtttcg 2364
Query: 601 aggattaataaactgaattaaacgaacatattaaagaaagtttgagacagggaagagaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2363 aggattaataaactgaattaaacgaacatattaaagaaagtttgagacagggaagagaaa 2304
Query: 661 agaaaaaaagaaaattactataactgtaaaaggaagataaatattacaatacaaggctat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2303 agaaaaaaagaaaattactataactgtaaaaggaagataaatattacaatacaaggctat 2244
Query: 721 ggggttatgctgtagttgtttgagaggtgaaagttctctcgaggattcgacagggttgcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2243 ggggttatgctgtagttgtttgagaggtgaaagttctctcgaggattcgacagggttgcc 2184
Query: 781 cattgcagaaaatgaaagggaagcagtkacgtcgttgttggagtttttagaaaataagga 840
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2183 cattgcagaaaatgaaagggaagcagtgacgtcgttgttggagtttttagaaaataagga 2124
Query: 841 ccaatacgatttctattcgggg-aaccgttacgggctttaaca 882
|||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2123 ccaatacgatttctattcggggaaaccgttacgggctttaaca 2081
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8840
Number of Sequences: 1807
Number of extensions: 8840
Number of successful extensions: 297
Number of sequences better than 1.0e-20: 1
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)